## org.apache.commons.math.genetics
Class Chromosome

    java.lang.Object
      org.apache.commons.math.genetics.Chromosome

All Implemented Interfaces:
  Comparable<Chromosome>, Fitness

Direct Known Subclasses:
  AbstractListChromosome

    public abstract class Chromosome

extends Object
implements Comparable<Chromosome>, Fitness

Individual in a population. Chromosomes are compared based on their fitness. The chromosomes are IMMUTABLE, and so their fitness is also immutable and therefore it can be cached.

Since:
  2.0
Version:
  $Revision: 811685 $ $Date: 2009-09-05 19:36:48 +0200 (sam. 05 sept. 2009) $

Field Summary
`private double` `fitness` Cached value of the fitness of this chromosome.

Constructor Summary
`Chromosome()`

Method Summary
`int` `compareTo(Chromosome another)` Compares two chromosomes based on their fitness.
`protected Chromosome` `findSameChromosome(Population population)` Searches the `population` for another chromosome with the same representation.
`double` `getFitness()` Access the fitness of this chromosome.
`protected boolean` `isSame(Chromosome another)` Returns `true`iff `another` has the same representation and therefore the same fitness.``
`void` `searchForFitnessUpdate(Population population)` Searches the population for a chromosome representing the same solution, and if it finds one, updates the fitness to its value.

Methods inherited from class java.lang.Object
`clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

Methods inherited from interface org.apache.commons.math.genetics.Fitness
`fitness`

Field Detail

### fitness

    private double fitness

  Cached value of the fitness of this chromosome.

Constructor Detail

### Chromosome

    public Chromosome()

Method Detail

### getFitness

    public double getFitness()

  Access the fitness of this chromosome. The bigger the fitness, the better the chromosome. Computation of fitness is usually very time-consuming task, therefore the fitness is cached.

  Returns:
    the fitness.

### compareTo

    public int compareTo(Chromosome another)

  Compares two chromosomes based on their fitness. The bigger the fitness, the better the chromosome.

  Specified by:
    `compareTo` in interface `Comparable<Chromosome>`
  Parameters:
    `another` - another chromosome to compare
  Returns:
    - -1 if `another` is better than `this`
    - 1 if `another` is worse than `this`
    - 0 if the two chromosomes have the same fitness

### isSame

    protected boolean isSame(Chromosome another)

  Returns `true`iff `another` has the same representation and therefore the same fitness. By default, it returns false -- override it in your implementation if you need it.

  ``
  Parameters:
    `another` - chromosome to compare
  Returns:
    true if `another` is equivalent to this chromosome

### findSameChromosome

    protected Chromosome findSameChromosome(Population population)

  Searches the `population` for another chromosome with the same representation. If such chromosome is found, it is returned, if no such chromosome exists, returns `null`.

  Parameters:
    `population` - Population to search
  Returns:
    Chromosome with the same representation, or `null` if no such chromosome exists.

### searchForFitnessUpdate

    public void searchForFitnessUpdate(Population population)

  Searches the population for a chromosome representing the same solution, and if it finds one, updates the fitness to its value.

  Parameters:
    `population` - Population to search

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